Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MSLMWDVLTGKESVRTLKKQLDKELIHSVYAPRKRS------KFHDIITSHHKEIDEVAINT-------KTAIHKVANQLDEAIKGEFRSKVEESIESNQQKYNHL
1QAX Chain:A ((111-220))
LMHAQVQIVGIQDPLNARLSLLRRKDEIIELANRKDQLLNSLGGGCRDIEVHTFADTPRGPMLVAHLIVDVRDAMGANTVNTMAEAVAPLMEAITGGQVRLRILSN---LADL
General information:
TITO was launched using:
RESULT:
Template:
1QAX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3557 for 567 contacts (-6.3/contact) +
2D Compatibility (PS) -9198 + (NN) 971 + (LL) 304
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -14430.0 ( -25.45 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_1QAX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QAX-query.scw
PDB file :
Tito_Scwrl_1QAX.pdb
: