Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKFGFLSVLEEELDKHLQYDFAMDWDKK-------NHTVEVTFILEAQNSSAIETVDDQGETSSEDIVFEDYVLFYNPVKSRFDAEDYLVTIPYEPKKGLSREFLAYFAETLNEVATEGLSDLMDFLTDDSIEEFGLSWDTDAFENGRAELKETEFYPYPRY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2GX8 Chain:A ((28-397)) | IPN---GHEIISLFESMYPKHLAMEGDKIGLQIGALNKPVRHVLIALDVTEEVVDEAIQLGA----NVIIAHHPLIFNPLKAIHTDKAYGKIIEKCIKNDI----AIYAAHTNVDVAKGG-------VNDLLAEALGLQNTEVLAPTYAEEMKKVVVFVPVTHAEEVRKALGDAGAGHIGNYSHCTFSSEGTGTFVPQQLERVEEVRIETIIPASLQRKVIKAMVTAHPYEEVAYDVYPLDNKGETLGLGKIGYLQEEMTLGQFAEHVKQSLDVKGARVVGKLDDKVRKVAVLGGDGNKYINQAKFKGADVYVTGDMYYHVAHDAMMLGLNIVDPGHNVEKVMKQGVQKQLQEKVDAKKLNVHIHASQLHTDPFIFV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11278 for 824 contacts (-13.7/contact) +
2D Compatibility (PS) -14027 + (NN) 2305 + (LL) 1012
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: -26138.0 ( -31.72 by residue)
QMean score : 0.302
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