Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQRFFHFLVWSLTSSATFVFIGILSFFGLNQSIFLSIVYGLASGAAVYIAGIWNARRLFLKKHELTGREYAYIKKNLEEARQKMVRLRKALFQAKSIQMFKQNAEMLRIVRRIYLLTKKEPKR-FYQAERFFYQTLDSVVELTEKYAFLSSH----PKKSKELSMSLSETRITLTELTKRLEEDLTQAMGDEIDELQFELDAAKHSLKK |
1YOZ Chain:A ((9-124)) | -------------------------------------------------------------GHMLYINSFLDRMGEIIRGEKSVEEADKLLDQKNIFEMFRSDCEEILNLYKSGKAEKEEVQRNFYLLKTYVVSQLSIHFERLKEFAESKGEKKLDPEVINEIALYIDRVEKEV----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YOZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1638 for 729 contacts (2.2/contact) +
2D Compatibility (PS) -11291 + (NN) -753 + (LL) 8640
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -5066.0 ( -6.95 by residue)
QMean score : 0.403
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