Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGKITVVGLGAGDMDQLTIGIHKLLTKADTLYVRTKDHPLIEELEKETKNIRFFDDIYEKHDQFEAVYEEIADILFEAARREDVVYAVPGHPFVAEKTVQLLTERQEKENVQVKVAGGQSFLDATFNVLQIDPIEG-FQFVDAGTL---SADELELRHHLIICQVYDQMTASEVKLTLMEKLPDDYEVVIVTAAGSRGEEIRTVPLFELDRNVALNNLTSVYIPPIKEEKLLYHEFSTFRSIIRELRGPNGCPWDKKQTHQSLKQYMIEECYELLEAIDEEDTDHMIEELGDVLLQVLLHAQIGEDEGYFTIDDVIKGISEKMVRRHPHVFKDVKVQDENDVLANWEDIKKAEKNTSESSLLDSVPKTLPALSKAAKLQKKAAKVGFDWEDVSDIWEKVSEEMKEFSSEVSEAPHEHNLKAEFGDILFALVNVARFYKIEPEEALTMTNDKFRRRFSYIEETAKEEGVELADMSLEDMDKLWNEAKETERRS |
| 2BB3 Chain:A ((20-217)) | SGHMIWIVGSGTC-RGQTTERAKEIIERAEVIYGSRRALELAGVVDDSRAR--ILR-SF----KG----DEI-RRIMEEGREREVAVISTGDPMVAG-LGRVLRE-I-AEDVEIKIEPAISSVQVALARLKVDLSEVAVVDC----FDAELTELLKYRHLLILADSH--FP-------L-ERLG-KRRVVLLENLCMEGERIREGNADSIEL---ESDYTIIFVEREV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115598 for 1465 contacts (-78.9/contact) +
2D Compatibility (PS) -20160 + (NN) -5076 + (LL) 22600
1D Compatibility (HY) -8800 + (ID) 2100
Total energy: -129134.0 ( -88.15 by residue)
QMean score : 0.478
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