Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLDKFLKVSRLIKRRTLAKEVADQGRISINGNQAK-ASSDVKPGDELTVRFGQKLVTVQVNELKDTTKKEEAANMYTILKEEKLGE
2VQE Chain:D ((99-152))
SRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKS---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2VQE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12445 for 357 contacts (-34.9/contact) +
2D Compatibility (PS) -5678 + (NN) -2535 + (LL) 3000
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -20458.0 ( -57.31 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_2VQE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VQE-query.scw
PDB file :
Tito_Scwrl_2VQE.pdb
: