Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNGHLNQILLITDGCSNHGEDPLAMAAFAKEQGITVNVIGIMEENQIDPEAMKEVEGIALAGGGVHQVVYASQLSQTVQMVTKKAMTQTLQGVVNQELKQILGKNVEMEELSPEKRGEVMEVVDELGETVHLQVLVLVDTSASMAP-KLPTVKEALIDLSVSLNSRIGNNEFAMCIFPGKKQEVELVLNWTPKLQSLSTLFAKLS-TGGITPTGPAIREATLQFEKI------RSRR--GMLADDERRFDEFGM
1ATZ Chain:A ((925-1042))
----------------------------------------------------------------------------------------------------------------------------------QPLDVILLLDGSSSFPASYFDEMKSFAKAFISKANIGPRLTQVSVLQYGSITTIDVPWNVVPE-KAHLLSLVDVMQREGGPSQIGDALGFAVRYLTSEMHGARPGASKAVVILVTDVSV------
General information:
TITO was launched using:
RESULT:
Template:
1ATZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37022 for 748 contacts (-49.5/contact) +
2D Compatibility (PS) -10974 + (NN) 4501 + (LL) 10204
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -38141.0 ( -50.99 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_1ATZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ATZ-query.scw
PDB file :
Tito_Scwrl_1ATZ.pdb
: