Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKHDIEKVLISEEEIQKKVKELGAELTSEYQDTFP--LAIGVLKGALPFMADLIKHIDTYLEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIKADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYES
1G9T Chain:B ((5-175))
-MKHTVE-VMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASS--------RDLKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDYAQRYRHLPYIG---------
General information:
TITO was launched using:
RESULT:
Template:
1G9T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147956 for 1228 contacts (-120.5/contact) +
2D Compatibility (PS) -17184 + (NN) -3157 + (LL) 1068
1D Compatibility (HY) -20800 + (ID) 4200
Total energy: -192229.0 ( -156.54 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_1G9T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G9T-query.scw
PDB file :
Tito_Scwrl_1G9T.pdb
: