Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAQRRPAGKKIPFQKDSFLQQFEKLAQSRKHHVLLESARGGRYSIAGLDPIATVKGKDGITTIKHGDEMLFKEGDPLRAFHSWFKTLETETNHEFPDFQGGAIGFLSYDYARYIENFKMLSLDDLETPDIYFLVFDDIAVYDHQEESLWLITHVNGSDQETADVKLSELEQMWLTELPAVTSREMKPETAGSFAAPFTEDGFSQAVEKIKQYIASGDVFQVNLSIRQSQSLS--VHPYQIYKTLREVNPSPYMAYLETP----DFQIICGSPELLVSKKGKLLETRPIAGTRSRGKTNEEDEALANELIHNEKERAEHVMLVDLERNDLGRVSRYGSVRVNEFMAIEKYSHVMHIVSNVQGELQD-GYDAVDIIHAVFPGGTITGAPKVRTMEIIEELEPTRRGLYTGSIGWFGYNHDLQFNIVIRTIYATGGQAFMQSGAGVVIDSVPKHEYKESFKKAFAMQRALELSEEETKIR |
3OS6 Chain:A ((20-392)) | ----------------------------TESSLFFAS---PTRTILAEGEFTTVKHHEIE-SF-------------PELVQAVLRNAKQ--AG---NPNPIVVGALPFDRR----------------KEVQLIVPEYSRISE----RLQLD------------------------------------NLTFEMTPVPDHEVYMKGVKQGIEKIKDGDLKKIVLSRSLDVKSSGKIDKQKLLRELAEHNKHGYTFAVNLPKDENSKTLIGASPELLVSRHGMQVISNPLAGSRPRSDDPVEDKRRAEELLSSPKDLHEHAVVVEAVAAALRPYCH--TLYVPEKPSVIHSEAMWHLSTEVKGELKNPNTSSLELAIALHPTPAVCGTPMEEAREAIQKIEPFDREFFTGMLGWSDLNGDGEWIVTIRCAEVQENTLRLYAGAGVVAESKPEDELAETSAKFQTMLKALGLN------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OS6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180084 for 3106 contacts (-58.0/contact) +
2D Compatibility (PS) -37845 + (NN) -10801 + (LL) 7768
1D Compatibility (HY) -10400 + (ID) 4250
Total energy: -235612.0 ( -75.86 by residue)
QMean score : 0.423
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