Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIAYIALGSNIGDRETYLRQAVALLHQHAAVTVTKVSSIYETDPVGYEDQAQFLNMAVEIKTSLNPFELLELTQQIENELGRTREV-RWGPRTADLDILLFNRENIETEQLIVPHPRMYERLFVLAPLAEICQQVEKEATSAETDQEGVRVWKQKSGVDEFVHSES
3HSD Chain:B ((2-135))
---VAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDALNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPEL-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HSD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108801 for 1002 contacts (-108.6/contact) +
2D Compatibility (PS) -13677 + (NN) -1834 + (LL) 2088
1D Compatibility (HY) -8800 + (ID) 3200
Total energy: -134224.0 ( -133.96 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_3HSD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HSD-query.scw
PDB file :
Tito_Scwrl_3HSD.pdb
: