Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MSYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQEREHFQQLLSDYPFQTSIELVAGGDERQHSVYKGLKAVKQEKIVLVHDGARPFIKHEQIDELIAEAEQTGA-AILAVPVKDTIKRVQDLQ--VSETIERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMEGGSVRVVEGSYTNIKLTTPDDLTSAEAIMESESGNKHV
1I52 Chain:A ((5-229))
HLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHP---QITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYC-GFHPQLVEGRADNIKVTRPEDLALAEFYLTR-------
General information:
TITO was launched using:
RESULT:
Template:
1I52.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111984 for 1806 contacts (-62.0/contact) +
2D Compatibility (PS) -23887 + (NN) -8610 + (LL) 532
1D Compatibility (HY) -13200 + (ID) 3900
Total energy: -161049.0 ( -89.17 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_1I52.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I52-query.scw
PDB file :
Tito_Scwrl_1I52.pdb
: