Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------------------------------------MRIMKFFKDVGKEMKKVSWPKGKELTRYTITVISTVIFFVIFFALLDTGISQLIRLIVE------------------------
1ML8 Chain:A ((1-134))
MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSERRERLFTHI-NLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA
General information:
TITO was launched using:
RESULT:
Template:
1ML8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53276 for 327 contacts (-162.9/contact) +
2D Compatibility (PS) -6293 + (NN) -475 + (LL) -28
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -62922.0 ( -192.42 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_1ML8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ML8-query.scw
PDB file :
Tito_Scwrl_1ML8.pdb
: