Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------MAFEDIPFLQYLGNAVDILLV-----------WYVIYKLIMVIR-------------GTKAVQL---LKGIVVIVLVRMA--SQYL-----GLSTLQWLMDQAITWGFLAIIIIFQPELRRALEQLGRGRF-------------FSRSGTPVEEAQQKTI-----EAITKAINYMAKRRIGALLTIERDTGMGDYIETGIPLNAKVSSELLINIFIPNTPLHDGAVIMKNNEIAAAACYLPLSESPFISKELGTRHRAAVGISEVTDSLTIIVSEETGGVSVAKNGDLHRELTEEALKEMLEAEFKKNTRDTS-----SNRWYWRGKKNG------- |
| 4N0N Chain:A ((22-422)) | SAVCTVCGAAPVAKSACGGWFCGNCVPYHAGHCHTTSLFANCGHDIMYRSTYCTMCEGSPKQMVPKVPHPILDHLLCHIDYGSKEELTLVVADGRTTSPPGRYKVGHKVVAVVADVGGNIVFGCGPGSHIAVPLQDTLKGVVVNKALKNAAASEYVEGPPGSGKTFHLVKDVLAVVGSATLVVPTHASMLDCINKLKQAGADPYFVVPKYTVLDFPRPGSGNITVRLPQVGTSEGETFVDEVAYFSPVDLARILTQGRVKGYGDLNQLGCVGPASVPRNLWLRHFVSLEPLR------VCHRFGAAVCDLIKGIYPYYEPAPHTTKVVFVPNPDFEKGVVITAYHKDRGLGHRTIDSIQGCTFPVVTLRLPTPQSLTRPRAVVAVTRASQELYIYDPFDQLSGLLKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55029 for 1915 contacts (-28.7/contact) +
2D Compatibility (PS) -28040 + (NN) -88 + (LL) 500
1D Compatibility (HY) -11600 + (ID) 2550
Total energy: -96807.0 ( -50.55 by residue)
QMean score : 0.173
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