Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNKPTLYWSLLMFKDWNFYIASTLKGLVFVGSQNKPIEELFEWARKRFPGSLLVEDDDKLEPYAVEITQYLEGKRKNFTVPVEYAGTQFQLAVWNALCEIPYGQTKSYSDIANDINKPAAVRAVGAAIGANPVLITVPCHRVIGKNGSLTGYRGGFEMKTLLLDLEKRASSEMDVPH
4ZYE Chain:A ((13-163))
-----PMLVYGLYKSPLGYITVAKDDKGFIMLDFCDCVEGN--------------SRDDSSFTEFFHKLDLYFEGKPINLREPINLKTYPFRLSVFKEVMKIPWGKVMTYKQIADSLGT--SPRAVGMALSKNPILLIIPCHRVIAENG-IGGYSRGVKLKRALLELEGVKIP------
General information:
TITO was launched using:
RESULT:
Template:
4ZYE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89890 for 1134 contacts (-79.3/contact) +
2D Compatibility (PS) -16344 + (NN) -7949 + (LL) 1776
1D Compatibility (HY) -14000 + (ID) 2350
Total energy: -128757.0 ( -113.54 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_4ZYE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZYE-query.scw
PDB file :
Tito_Scwrl_4ZYE.pdb
: