Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEPIEVFKALSNESRLQILQWLKEPDRHFAPHEGIDMNTIGVCVSQITDKLKMTQSTASQYLTILLRAGLIKAERIGKYTYYKRDEEAIGKLADFLKTEI
1R1T Chain:A ((37-112))
---AEFFAVLADPNRLRLLSLLA---------------RSELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRKQGRHVYYQLQDHHIVALYQ------
General information:
TITO was launched using:
RESULT:
Template:
1R1T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43242 for 497 contacts (-87.0/contact) +
2D Compatibility (PS) -8242 + (NN) -3109 + (LL) 1304
1D Compatibility (HY) -6000 + (ID) 950
Total energy: -60239.0 ( -121.21 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_1R1T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R1T-query.scw
PDB file :
Tito_Scwrl_1R1T.pdb
: