Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLFTAVISVPMLLLAVSVLMSVIYDSMFKPMNHGMPFHRSFAYPAMIVVFLISLLLLAFLFSKSIHSLLHKINLLNQTIRHLASDQRVPDKIEVKRADEIGELIKSVNLLIERTTYRELELRQQEEIKKELLQKLRHDINTPLTALRLQLFYLEDQCHG----QAVFESLYQQIEYISELTNEFNLYSAETLESSYIVNEEVRLNELLETAVKKWDYLYSMSGIELHYKPADQDVIWMSNTLWMERLFDNIFQNTLRHSKAKK-MEVTIEH----GDVFIRDDGIGFDR-------------NESSEGLGLKIIEDTCR-LLAITYELHTNDNGTGFLFSKE |
| 3A0R Chain:A ((131-343)) | -------------------------------------------------------------------------------------------------------------------------------ILGEMTARVAHEIRNPITIIGGFIMRMKKHLDDPETLKKYINIITNELSRLETIVKEILEYSKER----VLEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDMYTKVRVSVWNSGPPIPEELKEKIFSPFFTT------LGLSICRKIIEDEHGGKIWTENRENGVVFIFEIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75490 for 1237 contacts (-61.0/contact) +
2D Compatibility (PS) -19373 + (NN) -4155 + (LL) 12672
1D Compatibility (HY) -12400 + (ID) 1600
Total energy: -100346.0 ( -81.12 by residue)
QMean score : 0.401
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