Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIHLSILDQAPV--S---KGESPVTTLQHSVELAQLSEQWGYKRYWFAEHHSTKG----LASTAPEIMIARIAAQTNTIRVGSGGVLLPQYSPFKVAETFRQLEALYPNRIDLGVGRSPGGTTKTRLALTDG---VKKSLTEFNRQLQDVSYFLTDSLP-PDHPY---AGIKAAPLI--GTAPELWVLGLGENSARRAAHQGIGYVFGHFINPER-GENAFRIYRESFRPSAHFSNPSALFTIFVICAKTDEEAEELALSQDLWLLRVGKGLDSRVPSIEEAKAHPYTASDKKLIEENRKRMVIGSPTTVKQQLLDLTGCYETNEIMVLCNVFDFEAKKESYERLAELFL
3RAO Chain:A ((21-359))GVEYGFWLPIFGGWLRNVNDESMPPTFEYAKQTAQAAEQLGFSTTLIAELNLNDIKGVSAPSLEAWTTAAALAAVTDRLEIMTAVR-PGFHNPAVTAKMAANIDQLSNGRFTLNVVSAWWE--EEAKQYGGVFTAHDERYDRTEEFVTILKGLWKEEEFSYKGNFYELHHTHLSPKPVQKQGIKLYAGGESKRGKEVIVNHADAYVMHG-GTVEEVS-VKIEDMKNRRKKVTEEPLQSFGLAAYVICRHTEEEALEEWRRITDVK----------FVSKSQLEQ-QVKLNDYSVSNRGLRPNLIGTPEQIAERILAFE-KVGVTLLLLQFSP-----QLEEMKRFSEKVM


General information:
TITO was launched using:
RESULT:

Template: 3RAO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1606 -136920 -85.26 -443.11
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -85.26
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.456

(partial model without unconserved sides chains):
PDB file : Tito_3RAO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RAO-query.scw
PDB file : Tito_Scwrl_3RAO.pdb: