Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANYPKELPAQTQSRQPGIESEMNPSPVYEYEDYKGADKLKGKVALITGGDSGIGRAVSVAYAKEGADIAIVYKDEHEDAEETKKRVEQEGVKCLLIAGDVGEEEFCNEAVEKTVKELGGLDILVNNAG--EQHPKESIKDITSEQLHRTFKTNFYSQFYLTKKAIDYLKPGSAIINTTSINPYVGNPTLIDYTATKGAINAFTRTMAQALVKDGIRVNAVAPGPIWTP-----LIPATFPEETVAQFGQDTPMGRPGQPVEHVGCYVLLASDESSYMTGQTLHVNGGNFVTT
4MOW Chain:B ((11-254))--------------------------------------KLAGKVAIVTGASKGIGAAIAKALADEGAAVVVNYASSKAGADAVVSAITEAGGRAVAVGGDVSKAADAQRIVDTAIETYGRLDVLVNNSGVYEFAPIEA---ITEEHYRRQFDTNVFGVLLTTQAAVKHLGEGASIINISSVVTSITPPASAVYSGTKGAVDAITGVLALELGPRKIRVNAINPGMIVTEGTHSA--GSDLEAQVLGQ----TPLGRLGEPNDIASVAVFLASDDARWMTGEHLVVSGG-----


General information:
TITO was launched using:
RESULT:

Template: 4MOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1326 -116452 -87.82 -497.66
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -87.82
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.549

(partial model without unconserved sides chains):
PDB file : Tito_4MOW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MOW-query.scw
PDB file : Tito_Scwrl_4MOW.pdb: