Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MHVITTQVLFIFCFLLLIHSIETLAYATRLSGARVGFIASALSLFNVMVIVSRMSNMVQQPFTGHLIDDAGKNALAIVGEQFRFL--IFGSTVGTILGIILLPSFVALFSRAIIHLAGGGGSVFQVFRKGFSKQGFKNALSYLRLPSISYVKGFHMRLIPKRLFVINMLIT-SIYTIGVLSALYAGLLAPERSTTAVMASGLINGIATMLLAIFVDP----------KVSVLADDVAKGKRSYIYLKWTSVTMVTSRVAGTLLAQLMFIPGAYYIAWLTKWF-----------------------------------------------------------------------------------------------
4IC4 Chain:A ((625-996))KSVTRRNDIPEAAASPPSLLSFLRKNVGKDLSSIAMPVTSNEPISILQLISETFEYAPLLTKATQRPDPITFVSAFAISFLSIYRDKTRTLRKPFNPLLAETFELIREDMGFRLISEKVSH----RPPVFAFFAEHLD-----WECSYTVTPSQKF-WGKSIELNNEGILRLKFKTTGELFEWTQPTTILKNLIAGERYMEPVNEFEVHSSKGDKSHILFDKAGMFSGRSEGFKVSIIPPPSSNRKKETLAGKWTQ-SLANETTHETIWEVGDLVSNPKKKYGFTKFTANLNEITEIEKGNLPPTDSRLRPDIRAYEEGNVDKAEEWKLKLEQLQRERRNKGQDVEPKYFEKVSKNEWKYITGPKSYWERRKKHDWSDISQLW


General information:
TITO was launched using:
RESULT:

Template: 4IC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1313 -141351 -107.65 -547.87
target 2D structure prediction score : 0.22
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -107.65
2D Compatibility (Sec. Struct. Predict.) : 0.22
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.196

(partial model without unconserved sides chains):
PDB file : Tito_4IC4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IC4-query.scw
PDB file : Tito_Scwrl_4IC4.pdb: