Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQLSKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENRYYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS
3JTP Chain:A ((7-98))------------------------------------------------------------------------------------------------------------------------------LQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENRYYLYVDFCDMTDEEVENQLSIMLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS


General information:
TITO was launched using:
RESULT:

Template: 3JTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 414 -70537 -170.38 -766.71
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -170.38
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.766

(partial model without unconserved sides chains):
PDB file : Tito_3JTP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JTP-query.scw
PDB file : Tito_Scwrl_3JTP.pdb: