Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------MDKTSLIGIILAFVALSVGMVLKGVSFSALANPAAILIIIA---GTISAVVIAFPTK---------------------EIKKVPTLFRVLFKENKQLTIEELIPMFSEWAQ-----LARREGL-LALEASIEDVDDAFL-KNGLSMAVDGQSAEFIRDIMTEEVEAMEDRHQAGAAIFTQAGT----YAPTLGVLGAVIGLIAA--------LSHMDNTDELGHAISAAFVATLLGIFTGYVLWHPFAN-------------------------------------KLKRKS---KQEVKLREVMIEG-VLSVL---EGQAPKVIEQKLLM---YLPAKDRLK--FAEQGEAQNGEKKEEEA-----
1ZY7 Chain:A ((8-402))SRQPIPSEGLQLHLPQVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDVKDAKVISVSTGTKCINGEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQKRSIFQKSERGGFRLKENVQFHLYISTSPCGDARIFKARGQLRTKIESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLYHGDHLSRAMYQRI-SNIEDLPPLYTLNKPLLSGISNAEARQPGKAPNFSVNWTVGDSAIEVINATTGKDELGRASRLCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLAAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSLT


General information:
TITO was launched using:
RESULT:

Template: 1ZY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1158 -115763 -99.97 -430.34
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -99.97
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.164

(partial model without unconserved sides chains):
PDB file : Tito_1ZY7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZY7-query.scw
PDB file : Tito_Scwrl_1ZY7.pdb: