Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKKVRKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEAAESGIEDILIITGRNKRSIEDHFDRSAELEFNLREKGKTETLKEMQQIADLANIHYIRQKEPLGLGHAVLCAEHFIGDEPFAVLLGDDIMVSETPALRQLMD--VYDVYGTEVVGVQSVLPEDVSKYGIINTSGSQGHVYEVNDLVEKPSPEEAPSEIAVMGRYVLNSSIFSVLKTIGRGAGNEIQLTDALREVCRKEPIHARLLEGNRYDIGDKLGCFKASTEIGLMRPEMRSQLLAYLEDVIKRETKEMLR
1H5R Chain:C ((2-205))---KMRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILII------STPQDTPRFQQLLGDGSQWG--------------LNLQYKVQPSPDGLAQAFIIGEEFIGGDDCALVLGDNIFYGHD--LPKLMEAAVNKESGATVFAYHVNDPE---RYGVVEFDKNGTAI----SLEEKPL--EPKSNYAVTGLYFYDNDVVQMAKNLKPSARGELEITDINR-------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1H5R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1001 -62770 -62.71 -310.74
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain C : 0.73

3D Compatibility (PKB) : -62.71
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.422

(partial model without unconserved sides chains):
PDB file : Tito_1H5R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1H5R-query.scw
PDB file : Tito_Scwrl_1H5R.pdb: