Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNLKQIEFCLDKIGDMFPHAECELVHSNPFELVVAVALSAQCTDALVNRVTKTLFQKYKRPEDYLAVPLEELQQDIKSIGLYRNKAKNIQKLSKMIIEDYGG---------EVPRDRDELVKLPGVGRKTANVVVSVAFGVPAIAVDTHVERVSKRLGICRWKDSVLEVEKTLMRKVPKE--DWSVTHHRLIFFGRYHCKAQSPRCAECPLLSLCREGQKRDKKGLVKR
4UNF Chain:A ((33-245))------LAWVKERLHEEYGDQD-PTPRRDPMHELISTILSQRTTHADEEAAYQELR-TLGDWDAITLAPTDAVAHAIRRSNYPESKAPRIQETLRRIKAAPGGYDLDFLRDLPVKDALKWLTDLPGVGVKTASLVLLFNYARPVFPVDTHVHRVSTRVGVIP-RMGEQAAHRALLALLPPDPPYLYELHINFLSHGRQVCTWTRPKCGKCILRERCDAYALY--------


General information:
TITO was launched using:
RESULT:

Template: 4UNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 873 -40343 -46.21 -199.72
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -46.21
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_4UNF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UNF-query.scw
PDB file : Tito_Scwrl_4UNF.pdb: