Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDPSTLMILAIVAVAIIVLAVFFTFVPVMLWISALAAGVKISIFTLVGMRLRRVIPNRVVNPLIKAHKAGLNVGTNQLESHYLAGGNVDRVVNALIAAQRANIELTFERCAAIDLAGRDVLEAVQMSVNPKVIETPFIAGVAMDGIEVKAKARITVRAN----IERLVGGAGEETIVARVGEGIVSTIGSSDNHKKVLENPDMISQTVLGKGLDS---GTAFEILSIDIADVDIGKNIGAILQTDQAEADKNIAQAKAEERRAMAVAQEQEMRARVEEMRAKVVEAEAEVPLAMAEALREGNIGVMDYMNIKNIDADTEMRDSFGKLTKDPSDEDRKS
4FVG Chain:A ((16-122))-------------------------------------------------------------------------------------------------------------------------------MRTISFDIPPQEVLTKDSVTISVDGVVYYRVQNATLAVANITNA--DSATRLLAQTTLRNALGTKNLSQILSDREEIAHHMQST-LDDATDDWGIKVERVEIKDVKLPVQ-----------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4FVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 422 -16423 -38.92 -164.23
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -38.92
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.314

(partial model without unconserved sides chains):
PDB file : Tito_4FVG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FVG-query.scw
PDB file : Tito_Scwrl_4FVG.pdb: