Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIKAMGYVVIPRLPFKEFRDEKIYDHLFKRAEYRPNQELELGQTIIKVVELAKDFNWSAAQIKYSLDRMEKQGYIKLHRLPQKRGLIVTILHYADYIQLGNYMKNKALEPAQIEHQEVDDKMKNAFELYENKVARSVGPMEAQRIGYMVDDYGEEKVMEAIKTAFQLKGKAASLSYVQAILSNPFTQKRKEKQYGYKQSSQYRHRISNDHAGTSGKVSPLFGNKTGRIRRKG
4U0W Chain:A ((32-71))----------------------------------------QPDMPLPSEREYAEQFGISRMTVRQALSNLVNEGLLYRLK---------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4U0W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 68 -11798 -173.50 -294.95
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -173.50
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.760

(partial model without unconserved sides chains):
PDB file : Tito_4U0W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U0W-query.scw
PDB file : Tito_Scwrl_4U0W.pdb: