Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVTVREAKLEDIKDIAKVHVDSWRTTYHEIIPIDYLNSLNYKEFEDKWK-SRS---LKGVFVAQDEKGSVFGFASFGPIRSE---------------------------QEGYDGELYAIYLLEERQRQGAGRALLAKGAEFLLQHGFSSMFVWVIEQN-PSIIFYQAYSPERVAEDNFEIAGVRLKEVGLGWPDLSALKTLLNR
1U6M Chain:A ((2-177))-SLIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMI-DLLAEATAYPTYRYGYQRILVYEH-AGEVAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTMTI--------------------------


General information:
TITO was launched using:
RESULT:

Template: 1U6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 612 -14514 -23.71 -100.79
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -23.71
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.429

(partial model without unconserved sides chains):
PDB file : Tito_1U6M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1U6M-query.scw
PDB file : Tito_Scwrl_1U6M.pdb: