Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLVLIGGGYGNMRVLHRLLPNQLPDDVSITLIDRNPYHCLKTEYYALAAGTISDHHIRVSFPEHP---RLDVQYGDITSIDIVQKQVLFQ--DR--EPISYDDAIIGLGCEDKYHNVPGAPEFTYSIQTIDQSRETYQKLNNLSANATVAIVGAGLS-------------------------GVELASELRESRD------DLNIILFDRGNLILSSFPERLSKYVQKWFEEHGVRIINRANITKVEEG-VVYNHDDPISADAIVWTAGIQPNKVVRDLDVE-KDAQGRIVLTPHHNLPGDEHLYVVGDCASLPHAPSAQLAEAQAEQIVQILQKRWNGEA-LPESMPQFKLKGVLGSL-GK-KAGFGLVADRPLIGRVPRMLKSGLLWMYKHHNG
3H8L Chain:A ((2-357))-TKVLVLGGRFGALTAAYTLKRLV-GSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESF-QGGNIAI-GSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRLGVPTKVDKYYP----TIVCVADNPYE---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3H8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1693 -1250 -0.74 -3.99
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -0.74
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_3H8L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H8L-query.scw
PDB file : Tito_Scwrl_3H8L.pdb: