Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIKEAGPFPVKKEQFRMTVNGQAWEVAAVPTTHLSDLLRKEFQLTGTKVSCGIGRCGACSILIDGKLANACMT-MAYQADGHSITTIEGLQKEE-LDMCQTAFLEEGGFQCGYCTPGMIIALKALFRETPQPSDKDIEEGLA--GNLCRCTGY----GGIMRSACRIRRELNGGRRESGF
1DGJ Chain:A ((2-159))-------------ETKTLIVNGMARRLLVSPNDLLVDVLRSQLQLTSVKVGCGKGQCGACTVILDGKVVRACIIKMSRVAENASVTTLEGIGAPDCLHPLQHAWIQHGAAQCGFCTPGFIVSAKALLDENVAPSREDVRDWFQKHHNICRCTGYKPLVDAVMDAAAILRGE----------


General information:
TITO was launched using:
RESULT:

Template: 1DGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 734 -69048 -94.07 -460.32
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -94.07
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.555

(partial model without unconserved sides chains):
PDB file : Tito_1DGJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DGJ-query.scw
PDB file : Tito_Scwrl_1DGJ.pdb: