Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------MAFDKQKLDVTNDVTGRFQNGRLSLYHDNEMIGQMTSMNE---------YELKSGYSFE-NEKFYKTADVVSGDDAKYVDCDYENGWC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4QA5 Chain:A ((14-377))LVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVA---SMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQC-LIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDTFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGFNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV


General information:
TITO was launched using:
RESULT:

Template: 4QA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 137 3585 26.16 48.44
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : 26.16
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.210

(partial model without unconserved sides chains):
PDB file : Tito_4QA5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QA5-query.scw
PDB file : Tito_Scwrl_4QA5.pdb: