Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------MNENMSFKELYAIVRHRFVLILLI--------------TIGVTLIMGFVQF------------KVISPTYQASTQV-LVHESDGEENSNLSDIQRNLQYSSTFQSIMK------------------STALMEEVKAELHLSESASSLKGKVVT-SSENESEIINVAVQDHDPA-----KAAEIANT---LVNKFEKEVDERMNV-----------------QGVHILSEAKASESPMIKPARLRNMVMAFGAAVMGGITLAFFLHFLDDTCKSARQLSERTGLPCLGSVPD-VHKGRNRGIKHFGE
2IXS Chain:A ((5-323))NDIDETAATIDTARALLKSFGFEAQRHNVRSAVTLLALAGLKPGDHWADSTTPRLGVQKIMDWSGAYWAKPYATGSREDFRKKTLRQWVDNGFAVLNPDNLNIATNSQLNEYCLSDEAAQAIRSYGTDAFESALVDFLSKASDTVRARAEALRAAMISVDLADGDEFLLSPAGQNPLLKKMVEEFMPRFAPGAKVLYIGDTRGKHTRFEKRIFEETLGLTFDPHGRMPDLVLHDKVRKWLFLMEAVKSKGP-FDEERHRTLRELFATPVAGLVFVNCFEN-REAMRQWLPELAWETEAWVADDPDHLIHLNGSRFLGPYER


General information:
TITO was launched using:
RESULT:

Template: 2IXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1126 37106 32.95 159.94
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 32.95
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.295

(partial model without unconserved sides chains):
PDB file : Tito_2IXS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2IXS-query.scw
PDB file : Tito_Scwrl_2IXS.pdb: