Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------MKTLRTLCVLMILSGV------------IFFGLKIDAKDIDIPFLNSLKKVVSDSDTDSA--ANSKKELKGSAKPLDVILYNQMDA----------PRLYNGCEVTSLAMVLNYAGYDVTKNTLANQVATVPLTYSSGLKGDPND--------GFVGDMAN-GPGLGVYHRPIYQLAKTYAGDK-VSDLTGKSISAVY-QQLEKGNPVWVI------TTANFTPVDNMQTWKTPN----------GTIEITYSEHSVAVTGYDDKY-VYLNDPYGYKNRKTDRTSFEKAWKQMGSQAVVIQK---------------
4MT7 Chain:A ((45-381))QNRDQMRANVINEIMSTERHYIKHLKDICEGYLKQCRKRRDMFSDEQLKVIFGNIEDIYRFQMGFVRDLEKQYNNDDPHLSEIGPCFLEHQDGFWIYSEYCNNHLDACMELSKLMKDSRYQHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQASVLDWEGDDILDRSSELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFA-KKLEEKIRWLRAFREERKMVQEDEKIG


General information:
TITO was launched using:
RESULT:

Template: 4MT7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 824 -23428 -28.43 -94.09
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -28.43
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.102

(partial model without unconserved sides chains):
PDB file : Tito_4MT7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MT7-query.scw
PDB file : Tito_Scwrl_4MT7.pdb: