Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPRVEVGLVIHSRMHARAPVDVWRSVRSLPDFWRLLQVRVASQFGDGLFQAGLAGALLFNPDRAADPMAIAGAFAVLFLPYSLLGPFAGALMDRWDRRWVLVGANTGR---LALIAGVGTILAVGAGDVPLLVGALVANGL----ARFVASGLSAALPHVVPREQVVTMNSVAIASGAVSAFLGANFMLLPRWLLGSGDEGASAIVFLVAIPVSIALLWSLRFGPRVLGPDDTERAIHGSAVYAVVTGWLHGARTVVQLPTVAAGLSGLAAHRMVVGINSLLILLLVRHVTARAVGGLGTALLFFAATGLGAFLANVLTPTAIRRWGRYATANGALAAAATIQVA-AAGLLVPVMVVCGFLLGVAGQVVKLCADSAMQMDVDDALRGHVFAVQ-DALFWVSYILSITVAAALIPEHGHAPVFVLFGSAIYLAGLVVHTIVGRRGQPVIGR |
2CFQ Chain:A ((4-387)) | --------------------------LKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHD--INHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFG---PLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSR--RSNFEFGRARMFGCVGWALGASIVGIMFT-I-----NNQFVFWLGSGCALILAVLLFFAKTDAPSSATVAN----AVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGL----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -305605 for 3096 contacts (-98.7/contact) +
2D Compatibility (PS) -38303 + (NN) -9424 + (LL) 4748
1D Compatibility (HY) -11600 + (ID) 2550
Total energy: -362734.0 ( -117.16 by residue)
QMean score : 0.221
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