Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEHQSLPAPEASTEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFIAS----DPVWAKKFTDA-RVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAYLMKSPPEQLPDDIARAQLEEFIIG |
3BIO Chain:A ((8-138)) | -------------KKIRAAIVGYGNIGRYALQALRE--A--------------------PDFEIAGIVRR-------EL-------------------QPFRV-----------------------VSDIEQL---ESVDVALVCSPSR---EVERTALEILKKGICTADSFD-IHDGILALRRSLGDAAGKSGAAAVIASGW--DPGSDSVVRTLM----------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110384 for 883 contacts (-125.0/contact) +
2D Compatibility (PS) -12099 + (NN) 2501 + (LL) 14708
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: -107974.0 ( -122.28 by residue)
QMean score : 0.431
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