Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAQATTAGSFNHHASTVLQGCRGVPAAMWSEPAGAIRRHCATIDGMDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQV-------ASQAGDLRRLAES--RPVVPPVGR-----LGIRRAPRRQH-SPMTWR--RW-ALLCVGIAQI---ALGTVQGFGLDVGLTHQHPTGAGT-HLLNES---TSWSIALGVIMVGAALW--------PSAAAGLAGVLTAFVAI-LTGYVIVDALSGAVST----TRILTHLPVVIGAVLAIMVWR-SASGPRPRPDAVA-----A-EPDIVLPDNASRGRRRGHLWPTDGSAA- |
| 4RGL Chain:A ((8-335)) | YQPPYTITPAIVNLVAEIGEIIGRYTVLAEQNLTPRLRRE-NRIRTIQASLAIENNTLTLEQVTAVIDGKRVLGHPREIQEVRNAFATYEAMEDWDASVEGDLLAAHELLMRGLVDETGRYRSGGVGIFRGEQLVHMAPPADRVPKLMADLLDWLENTNEHPLVASCIFHYEFEFIHPFADGNGRMGRLWQTLILRNWKPLLAYLPVETVIRDRQEDYYRVLAVADSQADATPFVEFML--GALRDAVREAVSTDHQVTDQVAALIRAIGGGELSSNDLMQALGLSHRPTFRNNYLNPAMEDEWIERTQPDSPRSPTQRYRLTGKGQR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -115452 for 1884 contacts (-61.3/contact) +
2D Compatibility (PS) -28595 + (NN) -5859 + (LL) -64
1D Compatibility (HY) -4800 + (ID) 3250
Total energy: -158020.0 ( -83.87 by residue)
QMean score : 0.273
|
|
|