Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAILRGRAPLRLGLGGGGTDVEPYSSQFGGRILSVTIDKYAYAFAERGTGDEIAFRSPDRDR----AGQASIDD----LASL-EEDFPLHVAVYRRVIAEFNGGTPFPLQLATQVDAPPGSGLGSSSALVVAMLLTTCALIGSSPGPYELARLAWEIERVDLGMAGGWQDHYAAAFGGF---NFMESRPNGEVVVNPLRIRREVIAELEASLLLYFGGVSRLSSEV--------IADQQRNVVER--DA----------------DALAATHSICAE--ALEMKDLLVVGDIPGFADSLLRGWQAKKRTSTRISNPAIEHAYQVAQSS-GMVAGKVSGAGGGGFLMMIVDPRRRIEVARSLERECG--GSVAPCLFTKGGAVTWHIPESTAPVRRGVADAVASALGNAGILLCAGCVLATSHSTWRVPV |
| 1WUU Chain:A ((36-397)) | --ELAVSAPGRVNLIGEHTDY------NQGLVLPMALELMTVLVGSPRKDGLVSLLTTSEGADEPQRLQFPLPTAQRSLEPGTPRWANYVKGVIQYYPAA--P-L-PGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPDSGTIAARAQVCQQAEHSFAGMPCGIMDQFISLMGQKGHALLIDCRSL---ETSLVPLSD-----PKLAVLITNSNVRH--ASSEYPVRRRQCEEVARALGKESLREVQLEELEAARDLVSKEGFRRARHVVGEIRRTAQAAAALRRGDYRAFGRLMVESHRSLRDDY-EVSCPELDQLVEAALAVPGVYGSRMTGGGFGGCTVTLLEASAAPHAMRHIQEHYGGTATFYLSQ-AADGAKVL--------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1WUU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -152160 for 2852 contacts (-53.4/contact) +
2D Compatibility (PS) -34217 + (NN) -14379 + (LL) 4372
1D Compatibility (HY) -6800 + (ID) 2700
Total energy: -205884.0 ( -72.19 by residue)
QMean score : 0.429
|
|
|