Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGISRRTFGLAAGFGAIGAGGLGGGCSTRSGPTPTPEPASRGVGVVLSHE-----QFRTDRLVAHAQAAEQAGFRYVWASDHLQPWQD-----------N-EGHSMFPWLTLALVGNSTSSILFGTGVTCPIYRYHPATVAQAFASLAILNPGRVFLGLGTGERLNEQAATDTFGN-----YRERHDRLIEAIVLIRQLWSGE----------------------RISFTGHYFRTDELKLYDTPAM-PPPIFVAASGPQSATLAGRYGDGWIAQARDIN-DAKLLAAFAAGAQAAGRDPTTLGKRAELFAVVGDDKAAARAADLWRFTA--------GAVDQ--PNPVEI--QRAAESNPIEKVL---------ANWAVGTDPGVHIGAVQAVLD-AGAVPFLHFPQDDPITAIDFYRTNVLPELR |
| 3B9O Chain:A ((17-398)) | ----------------------------------------HIAHGLWRHPENQRHRYTDLNYWTELAQLLEKGKFDALFLADVVGIYDVYRQSRDTAVREAVQIPVNDPLMLISAMAYVTKHLAFAVTF-STTY-EHPYGHARRMSTLDHLTKGRIAWNVVTSHLPSADK---NFGIKKILEHDERYDLADEYLEVCYKLWEGSWEDNAVIRDIENNIYTDPSKVHEINHSGKYFEVPGPHLCEPSPQRTPVIYQAGMSERGREFAAKHAECVFLGGKDVETLKFFVDDIRKRAKKYGRNPDHIKMFAGICVIVGKTHDEAMEKLNSFQKYWSLEGHLAHYGGGTGYDLSKYSSNDYIGSISVGEIINNMSKLDGKWFKLSVGTPKKVADEMQYLVEEAGIDGFNLVQYV-SPGTFVDFIELVVPELQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117895 for 2435 contacts (-48.4/contact) +
2D Compatibility (PS) -34112 + (NN) -23185 + (LL) 332
1D Compatibility (HY) -9200 + (ID) 2800
Total energy: -186860.0 ( -76.74 by residue)
QMean score : 0.429
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