Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILVTGGVRSGKSTHAEALLGDAA-------DVVYVAPGRPAAGSDP-DW----DARVALH-RAR--RPPTWLTVET-ADVATALSEA--RSPVLVDCLGTWLTAIMDGEA-LWSAATADVYAVLEARLDGLCAALTGLP-TAIVVTNEVGLGVVPSHSSGVLFRDLLGTINRR--------------VAAVCDEVHLVIAGRVLKL
4FWI Chain:B ((36-245))
-VTAIVGESASGKSTIIEAMTKTLPPNGRILSGRVLYK-GKDLLTMREEELRKIRWKEIALVPQAAQQSLNPTMKVIEHFKDTVEAHGVRWSHSELIEKASEKLRMVRLNPEAVLNSYP-LQLSGGMKQRVLIALAL--LLDPVVLILDEPTSALDVLT--QAHIIQLLKELKKMLKITLIFVTHDIAVAAELADKVAVIYGGNLVE-
General information:
TITO was launched using:
RESULT:
Template:
4FWI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77796 for 1078 contacts (-72.2/contact) +
2D Compatibility (PS) -17654 + (NN) -3879 + (LL) 212
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -104417.0 ( -96.86 by residue)
QMean score : 0.226
(partial model without unconserved sides chains):
PDB file :
Tito_4FWI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FWI-query.scw
PDB file :
Tito_Scwrl_4FWI.pdb
: