Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTIGTRKRVAVVTGASSGIGEATARTLAAQGFHVVAVARRADRITALANQIGGTAIVADVTD----DAAVEALARALSRVDVLVNNAGGAKGLQFVADADLEH---WRWMWDTNVLGTLRVTRALLPKLIDSGDGLIVTVTSIAAIEVYDGGAGYTAAKHAQGALHRTLRGELLGKPVRLTEIAPGAVETEFSLVRFDGDQQRADAVYAGMTP---LVAADVAEVIGFVATRPSHVNLDQIVIRPRDQASASRRATHPVR
3P19 Chain:C ((16-251))
-------KKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-NLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAG----MMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTE--LLS-----------------GGVLAADDVARAVLFAYQQPQNVCIREIALAPTKQ------------
General information:
TITO was launched using:
RESULT:
Template:
3P19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139139 for 1751 contacts (-79.5/contact) +
2D Compatibility (PS) -22570 + (NN) -7202 + (LL) 2168
1D Compatibility (HY) -12400 + (ID) 3900
Total energy: -183043.0 ( -104.54 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_3P19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P19-query.scw
PDB file :
Tito_Scwrl_3P19.pdb
: