Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEIL-DPEPPEEARGVIKHAVWACPTQALSIRETGE
4ID8 Chain:A ((5-69))
--LTIHVDQDKCQGHARCKALAPELFDLDDYGNAHEKGDGVVPADLIDKAWLAKSNCPENAIDITED--
General information:
TITO was launched using:
RESULT:
Template:
4ID8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33515 for 449 contacts (-74.6/contact) +
2D Compatibility (PS) -6763 + (NN) -6060 + (LL) -32
1D Compatibility (HY) 0 + (ID) 1050
Total energy: -47420.0 ( -105.61 by residue)
QMean score : 0.712
(partial model without unconserved sides chains):
PDB file :
Tito_4ID8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ID8-query.scw
PDB file :
Tito_Scwrl_4ID8.pdb
: