Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIGIGGGQTI-------------DLNVLLSA---AINFFLIAFAVYF-LVVLPYNTLRKKGE--------VEQPGDTQVV-----------------LLTEIRDLLAQTNGDSPGRHGGRGTPSPTDGPRASTESQ-------- |
| 2HLY Chain:A ((0-206)) | GYFEGMLIKQTDYFRIYRVINSLLISQ-NADPASASMYFSTFGAFILQQHYKVKAVPKGGLAAYNLGGTVLLFADHREYVTGAGENFHCWVEADGWAIDFMAPAFSEGTDALAVPAKMFQRPLSAMAASINDLGQSGDFFYRSEPEATARRFADWHKQAMIGDMASVAANWFRKSPKQMAASLSVTDRDGKARTVPLTGEMLTGAW |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19966 for 1100 contacts (-18.2/contact) +
2D Compatibility (PS) -15035 + (NN) 4230 + (LL) 204
1D Compatibility (HY) 9600 + (ID) 550
Total energy: -21517.0 ( -19.56 by residue)
QMean score : 0.130
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