Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAALGTKD-FQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVHAW
4FNO Chain:B ((6-191))
-----LIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSLVADRKYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALAGFFRIAPDAILVAHDELDMPPGVAKLKTGGGHGGHNGLRDIIAQLGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQELLDTSIDFALGVLPEMLAGDWTRAMQKLHS-
General information:
TITO was launched using:
RESULT:
Template:
4FNO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113619 for 1549 contacts (-73.3/contact) +
2D Compatibility (PS) -19662 + (NN) -3453 + (LL) 648
1D Compatibility (HY) -11600 + (ID) 3400
Total energy: -151086.0 ( -97.54 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_4FNO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FNO-query.scw
PDB file :
Tito_Scwrl_4FNO.pdb
: