Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARQVFDDKLLAVISGNSIGVLATIKHDGRPQLSNVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDGWSYAVAEGTAQLTPPAAAPDDDTVEALIALYRNIAGEHSDWDDYRQAMVTDRRVLLTLPISHVYGLPPGMR
2ASF Chain:A ((11-132))
------SDDALAFLSERHLAMLTTLRADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQVD--GARWLSLEGRAAVNSDIDA-VRDAELRYAQRYRTP-------------RPNPRRVVIEVQIERVLGSAD---
General information:
TITO was launched using:
RESULT:
Template:
2ASF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48979 for 901 contacts (-54.4/contact) +
2D Compatibility (PS) -13462 + (NN) -6510 + (LL) 1216
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: -72885.0 ( -80.89 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_2ASF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ASF-query.scw
PDB file :
Tito_Scwrl_2ASF.pdb
: