Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSTPPASAGRSTPPALAGHSTPPALAGHSTLCGRPVAGDRALIMAIVNRTPDSFYDKGATFS-DAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGG-VDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNKDVVGETLGVDLTERLEGTLAATALAAAAGARMFRVHEVAATRRVLEMVASIQGVRPPTRTVRGLA
4D8Z Chain:B ((37-293))--------------------------------------NEKTLIMGILN------SDGGSYNEVDAAVRHA-KEMRDEGAHIIDIGGE--------SVEEEIKRVVPMIQAVSKEVK-LPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNM------------NYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIG------------


General information:
TITO was launched using:
RESULT:

Template: 4D8Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153837 for 2039 contacts (-75.4/contact) +
2D Compatibility (PS) -27183 + (NN) -15387 + (LL) 2052
1D Compatibility (HY) -20000 + (ID) 4300
Total energy: -218655.0 ( -107.24 by residue)
QMean score : 0.483

(partial model without unconserved sides chains):
PDB file : Tito_4D8Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D8Z-query.scw
PDB file : Tito_Scwrl_4D8Z.pdb: