Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDHVREADDANIDDLLGDLGGTARAERAKLVEWLLEQGITPDEIRATNPPLLLATRHLVGDDGTYVSAREISENYGVDLELLQRVQRAVGLARVDDPDAVVHMRADGEAAARAQRFVELGLNPDQVVLVVRVLAEGLSHAAEAMRYTALEAIMRPGATELDIAKGSQALVSQIVPLLGPMIQDMLFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVSAEELGHLAGRLAGLARDLTA-PPVWFIKTIGDAVMLVCPDPAPLLDTVLKLVEVVDTD----------------------------------------NNFPRLRAGVASGMAVSRA------GDWFGSPVNVASRVTGVARPGAVLVADSVREALGDAPEADGFQWSFAGPRRLRGIRGDVRLFRVRRGATRTGSGGAAQDDDLAGSSP |
1FX2 Chain:A ((9-224)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PTDPVTLIFTDIESSTALWAA-HPDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGDSFMIASKSPFAAVQLAQELQLCFLHHDWGTNALDDSYREFEEQRAEGECEYTPPTAHMDPEVYSRLWNGLRVRVGIHTGLCDIRHDEVTKGYDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAED-RKQIDVTALGDVALRGVSDPVKMYQLNTVPSRNF--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FX2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -127606 for 1342 contacts (-95.1/contact) +
2D Compatibility (PS) -17601 + (NN) -3925 + (LL) 16276
1D Compatibility (HY) -8000 + (ID) 1900
Total energy: -142756.0 ( -106.38 by residue)
QMean score : 0.443
|
|
|