Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEPTVARPDIDPVLKML---LDTFPV--TFTAADGVEVARARL-----RQLKTPPELLPELRIEERTV-GYDGLTDIPVRVYWPPVVRDNLPVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDYRLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAGDSAGGNISAVMAQLARDVGGPPLVFQLLWYPTTMADLSLPSFTENADAP-ILDRDVIDAFLAWYVPGLDISDHTMLPTTLAPGNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVPAAAEATGRGLAALKRALHA |
1JJI Chain:C ((6-307)) | ----------IDPVYYQLAEYFDSLPKFDQFSSAREYREAINRIYEERNRQLSQHERVE---RVEDRTIKGRNG--DIRVRVYQQ---KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIF----ADLENLPPALIITAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQ-IAAL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184413 for 2573 contacts (-71.7/contact) +
2D Compatibility (PS) -31337 + (NN) -17905 + (LL) 1360
1D Compatibility (HY) -21200 + (ID) 6100
Total energy: -259595.0 ( -100.89 by residue)
QMean score : 0.478
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