Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQVYTSATHWGVFTARVHGGDIAAVAAL--------A-SDTNPAPQ--LQNLPGAVRHRSRIANPAVRRGWLQ--------------------HGP----GPSSARGAEEFVEVSWDELIELLASELRRTVDRYGNEAIYGSSYGWASAGRFHHAQSQVHRFLNMLGGYTASRHSYSAGASEVIFPHIVGAALFEALAETT-TW-DVIVDHTALLVAFGGLPVKNTAVMPGGTTAHPDRDYVGRYRARGGRLVSVSPLRDDIAAIAGPLDDRCRWLAPVPGTDVAIMLGLAYVLATES------LADRAFLGRYCTGYERFERY------------------------------------------------------------------------------------------------------------------------------L-----------------------LGLDDGIPKTPEWAAALSGLAAGDLRDLARRM-AE-----HRTLITTSLSLQRIEHGEQTVWMAATLAAMLGQIGLPGGGFGHGYSSNGVGN-PPL---A---CGL-PALP---------------QG--------------NN--------------PVST-FIPVAAIS---------ELLQRP-GQRLAYNGRL-----------LELPDIKCVYWAGGNPFHHHQNLPR-LRRA-------------------------------LSRVDTIVVHEQYWTAMAKHADIVVPTTTSFERDDFAASK-TNPTLIAMPAMVPPYANARDDYHTFSALAHRLGFGKQF-----------T--E----G----RSAREWL------------------------------------------------EHM--YDKWSAELDF--P---------------------------V----PSFAEFWRT-G-------------R-------------LELPTRTG----LTWLADFRA-DPAAHPLGTPSGRIEIFSDTVDAFALPDCAGHPTWYEPSEWLG--------GPRAARYPLHLIANQPRTRLHSQLDHG--GASMASKIRGREPIRIHPDDAAARELTDGDIVRVFNDRGACLAGVVIDDGLRPKVVQLSTGAWFDPADPRDPDSMCVHGNPNALSNDSGTSSLAHGSTG----------------QHVL-VQIERFTGELPPVRAHEPPRLA |
| 1Q16 Chain:A ((50-1229)) | --HGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPA--MS-MVSYASGARYLSLIGGTCLS-----FYDWYCDLPP--ASP--QTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTP--------DA-HFFTEVRYKGTKTVAVTPDYAEIAKLC------DLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNH-PRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDMNTSDMH-PFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRD--FGESLLVYRPPIDTRSVKEVIGQKSNGNQEKALNFLTPHQKWGIHSTYSDNLLMLTLGR---GGPVVWLSEADAKDLGIADNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRI--TPKPTHMIGGYAHLAYGFNYYGTVGSNRDEFVVVRKMK--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209117 for 6161 contacts (-33.9/contact) +
2D Compatibility (PS) -76130 + (NN) -36108 + (LL) 1988
1D Compatibility (HY) -12400 + (ID) 6700
Total energy: -338467.0 ( -54.94 by residue)
QMean score : 0.451
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