Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAYKTVVVGTDGSDSSMRAVDRAAQIAGA-DAKLIIASAYLPQHEDARAADILKD--ESYKVT---GTAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT
1MJH Chain:A ((3-160))
-VMYKKILYPTDFSETAEIALKHVKAFKTLKAEEVILLHVIDEREIK---------VEEFENELKNKLTEEAKNKMENIKKELEDVGFK-VKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVKRK
General information:
TITO was launched using:
RESULT:
Template:
1MJH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55738 for 1008 contacts (-55.3/contact) +
2D Compatibility (PS) -14485 + (NN) -2704 + (LL) 952
1D Compatibility (HY) -7600 + (ID) 1600
Total energy: -81175.0 ( -80.53 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_1MJH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MJH-query.scw
PDB file :
Tito_Scwrl_1MJH.pdb
: