Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYPLGEALLALYRWRGPLINAGVGGHGYTYLLGAEANRFVFAN-ADAFSWSQTFESLVPVDGPTALIVSDGADHRRRRSVVAPGLRHHHV--QRYVATMVSNIDTVIDGWQP--GQRLDIYQELRSAVRRSTAESLFGQRLAVHSDFLGEQLQPLLDLTR---RPPQVMRLQQR--VNSPGWRRAMAARKRIDDLIDAQIADARTAP--RPDDHMLTTLISGCSE----EGTTLSDNEIRDSIVSLITAGYETTSGALAWAIYALLTVPGTWESAASEVARVLGG-RVPAADDLSALTYLNGVVHETLRLYSPGVI-SARRVLRDLWFDGHRIRAGRLLIFSAYVTHRLPEIWPEPTEFRPLRWDPNAADYRKPAPHEFIPFSGGLHRCIGAVMATTEMTVILARLVARAMLQLPAQRTH-RIRA-ANFAALRPWPGLTVEIRKSAPAQ |
| 1R9O Chain:A ((32-475)) | ---DISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSSPWI----PIIDYFPG-THNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGN--FKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVPP-FYQLCFIPIHH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231015 for 3352 contacts (-68.9/contact) +
2D Compatibility (PS) -43989 + (NN) -11168 + (LL) 1252
1D Compatibility (HY) -17600 + (ID) 3800
Total energy: -306320.0 ( -91.38 by residue)
QMean score : 0.459
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