Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDFDTERVSRAVAAALVGPGGVALVVKVFAGLPGVIHTPARRGFFRSNPERIQIGDWRYEVAHDGRLLAAHMVNGIVIAEDALIAEAVGPHLARALGQIVSRYGATVIPNINAAIEVLGTGTDYRF
2KCK Chain:A ((1-112))
MVDQNPEEYYLEGVLQY-DAGNYTESIDLFEKAIQL--DPEESKYWLMKGKALYNLE-RYEEAVDCYNYVINVIED-------EYNKDVWAAKADALRYIEGKEVEAEIAEARAKLE----HHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KCK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17201 for 738 contacts (-23.3/contact) +
2D Compatibility (PS) -11674 + (NN) -2024 + (LL) 1760
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -32089.0 ( -43.48 by residue)
QMean score : 0.217
(partial model without unconserved sides chains):
PDB file :
Tito_2KCK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KCK-query.scw
PDB file :
Tito_Scwrl_2KCK.pdb
: