Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------MQTLTVAD---------FALRLAVGVGCGAIIGLERQWRARMAGLRTNALVATGATLFVLYAV-------ATEDSSPTRVASYVVSGIGFL-------------GGGV---ILREGFNVRGLNTAATLWCSAAVGVLAASGHLVFTLIGTGTIVAVHLLG-RPLGRLVDRDNAVEDEG-----LQPYQVRVICRPKAETYVRAHIVQRTSSNDITLRGIRTGPAGDDNITLTAHLLMVGHTPAKLERLVAELSLQ-PGVYAVHWYAGEHAQAE---------------------- |
| 4NTC Chain:A ((2-326)) | MSIGKLLSNGALLVDVLIIGAGPAGLSTATGLARQLHTAVVFDSGVYRNAKTQHMHNVLGWDHRNPAELRAAGRADLTT-RYSTIQFQNSTIEAIRQVETNQLFEARDNEGHSWYGRKVVLATGVRDIPLDIEGYSECWANGIYHCLFCDGYEERGQETVGVL-ALGPIANPARALHLARMALRLSESVTIYTNGNEQLAKEIQQAAEESPVGASGLKFEARPIRRFEKGDVAKTVIVHLGESESKTEGFLV---YNPQTEVNGPFAKQLALNMTEGGDILTTPPFYETSVPGVFAVGDCATPLKAVTPAVSMGSLAAGGLVAQLQAQAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99372 for 1570 contacts (-63.3/contact) +
2D Compatibility (PS) -23969 + (NN) 914 + (LL) 464
1D Compatibility (HY) -800 + (ID) 2050
Total energy: -124813.0 ( -79.50 by residue)
QMean score : 0.142
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