Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREK-PCRATTAGIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGL----GDVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRR--AITRPTHFVPTTEGFTAAARAGLGWGMFPEKLAASPLADGSFVRVC-D---IHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYRGQQRRRRPG |
| 3SZP Chain:A ((1-290)) | -----MKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHIELMMSNQ---ADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSH-PQPTHAEELHQHQLLKGYPLL--KWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVIGYHL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121858 for 2002 contacts (-60.9/contact) +
2D Compatibility (PS) -29704 + (NN) -4248 + (LL) 776
1D Compatibility (HY) -9600 + (ID) 2450
Total energy: -167084.0 ( -83.46 by residue)
QMean score : 0.426
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